PYENSEMBL(1)

NAME
pyensembl - installs data from the Ensembl genome database

DESCRIPTION
usage: Manipulate pyensembl's local cache.

    pyensembl {install, delete, delete-sequence-cache} [--release XXX --species human...]

  To install particular Ensembl human release(s):

    pyensembl install --release 75 77

  To install particular Ensembl mouse release(s):

    pyensembl install --release 75 77 --species mouse

  To delete all downloaded and cached data for a particular Ensembl release:

    pyensembl delete-all-files --release 75 --species human

  To delete only cached data related to transcript and protein sequences:

    pyensembl delete-index-files --release 75

  To list all installed genomes:

    pyensembl list

  To install a genome from source files:

pyensembl install
    --reference-name "GRCh38" --gtf URL_OR_PATH --transcript-fasta URL_OR_PATH --protein-fasta URL_OR_PATH

pyensembl: error: the following arguments are required: action

AUTHOR
 This manpage was written by Nilesh Patra for the Debian distribution and
 can be used for any other usage of the program.